C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000496795 RP11-298C3.2-001 ENSG00000228519 9606 - X:25645722-25646327 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; KidneyOvaryENST00000496795
Transcript ID Kidney Ovary
ENST00000496795 0.085±0.00 0.224±0.19

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007PA CIL_0007PA_0001 UCNEbase X:24805232-25650665
CIL_0008W5 CIL_0008W5_0001 VISTA X:25082107-25684217

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000183528 RANBP1-001 protein_coding Mus_musculus 0 665
ENSMUST00000115645 Ranbp1-001 protein_coding Mus_musculus 0 665
ENSMUST00000185058 RANBP1-003 protein_coding Mus_musculus 0 649
ENSMUST00000052325 Ranbp1-003 protein_coding Mus_musculus 0 649
ENSMUST00000121155 Gm5391-001 processed_pseudogene Mus_musculus 0 556
ENSMUST00000184634 RANBP1-004 retained_intron Mus_musculus 0 375
ENSMUST00000123073 Ranbp1-004 retained_intron Mus_musculus 0 375
ENSMUST00000185140 RANBP1-002 processed_transcript Mus_musculus 0 351
ENSMUST00000134035 Ranbp1-002 processed_transcript Mus_musculus 0 351

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