C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phosphoglycerate mutase family member 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000498926 PGAM5-005 ENSG00000247077 9606 + 12:132710819-132722734 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000498926
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000498926 5.719±0.00 6.906±0.00 1.814±0.00 2.477±0.47 3.633±0.13 1.967±0.10 3.790±1.27 4.351±0.92 4.253±0.09 3.688±1.98 13.145±10.15 8.534±3.15 6.769±1.24 6.521±0.29

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00006L CIL_00006L_0002 CGP 12:132710819-132761888

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004721 IEA phosphoprotein phosphatase activity
GO:0005096 IMP GTPase activator activity
GO:0005739 IDA mitochondrion
GO:0005741 IEA mitochondrial outer membrane
GO:0016021 IEA integral component of membrane
GO:0016311 IEA dephosphorylation
GO:0016791 IMP phosphatase activity
GO:0032403 IDA protein complex binding
GO:0043547 IMP positive regulation of GTPase activity
GO:0070266 IMP necroptotic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000112505 Pgam5-001 protein_coding Mus_musculus 0 891
ENSMUST00000059229 Pgam5-002 protein_coding Mus_musculus 0 872
ENSMUST00000188105 Tsen15-007 retained_intron Mus_musculus 0.00001 57
ENSMUST00000141278 Lypla1-004 retained_intron Mus_musculus 0.00001 57

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