C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transmembrane protein 167A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000502346 TMEM167A-001 ENSG00000174695 9606 - 5:83052846-83077496 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000502346
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000502346 11.584±0.00 7.913±0.00 8.571±0.00 17.933±4.28 11.739±3.17 6.586±1.06 6.777±1.18 9.451±1.09 7.604±0.19 10.114±0.88 2.180±1.22 8.474±1.50 11.108±2.64 7.310±2.66

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005TL CIL_0005TL_0002 CGP 5:83052846-83353787

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005794 IEA Golgi apparatus
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000161568 Tmem167-001 protein_coding Mus_musculus 0 566
ENSMUST00000117342 Gm14163-001 processed_pseudogene Mus_musculus 0 270
ENSMUST00000161457 Tmem167-002 nonsense_mediated_decay Mus_musculus 0 265
ENSMUST00000012566 Tmem167-003 protein_coding Mus_musculus 0 241
ENSMUST00000190251 RP24-161C8.1-001 processed_pseudogene Mus_musculus 0 213
ENSMUST00000186718 RP24-157A17.1-001 processed_pseudogene Mus_musculus 8.40779e-45 187

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