C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005TL_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000035914-ENSDARG00000010732 CGP 7955 10:44591093-44662728
GeneTranscriptPositionBiotype
ENSDARG00000010732 (xrcc4)
X-ray repair complementing defective repair in Chinese hamster cells 4 		ENSDART00000024644 (xrcc4-001) 44597966-44662728 protein_coding
ENSDARG00000035914 (tmem167a)
transmembrane protein 167A 		ENSDART00000089965 (tmem167a-001) 44591093-44597949 protein_coding
ENSDART00000138099 (tmem167a-003) 44591409-44594036 protein_coding
ENSDART00000148293 (tmem167a-002) 44591093-44597912 protein_coding
CIL_0005TL_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000174695-ENSG00000152422 CGP 9606 5:83052846-83353787
GeneTranscriptPositionBiotype
ENSG00000152422 (XRCC4)
X-ray repair complementing defective repair in Chinese hamster cells 4 		ENST00000282268 (XRCC4-201) 83077498-83353758 protein_coding
ENST00000338635 (XRCC4-002) 83077527-83353711 protein_coding
ENST00000396027 (XRCC4-001) 83077570-83353711 protein_coding
ENST00000509268 (XRCC4-005) 83104908-83259339 processed_transcript
ENST00000511817 (XRCC4-003) 83077593-83353787 protein_coding
ENST00000542685 (XRCC4-004) 83077557-83311069 processed_transcript
ENSG00000174695 (TMEM167A)
transmembrane protein 167A 		ENST00000502346 (TMEM167A-001) 83052846-83077496 protein_coding
ENST00000503892 (TMEM167A-004) 83056884-83077863 processed_transcript
ENST00000504622 (TMEM167A-003) 83056727-83077453 processed_transcript
ENST00000509770 (TMEM167A-005) 83056767-83077424 processed_transcript
ENST00000511118 (TMEM167A-007) 83056535-83061975 retained_intron
ENST00000511450 (TMEM167A-002) 83054062-83077367 processed_transcript
ENSG00000238835 (SCARNA18)
small Cajal body-specific RNA 18 		ENST00000459004 (SCARNA18-201) 83064204-83064337 snoRNA
ENSG00000243385 (CTD-2110K23.1)
 ENST00000468914 (CTD-2110K23.1-001) 83201229-83202141 processed_pseudogene
ENSG00000251552 (COQ10BP2)
coenzyme Q10 homolog B pseudogene 2 		ENST00000513804 (COQ10BP2-001) 83279921-83280644 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005TL_0001ENSDARG00000010732ENSDART00000024644ENSDARG00000035914ENSDART00000089965ENSDART00000138099ENSDART00000148293CIL_0005TL_0002ENSG00000152422ENST00000282268ENST00000338635ENST00000396027ENST00000509268ENST00000511817ENST00000542685ENSG00000174695ENST00000502346ENST00000503892ENST00000504622ENST00000509770ENST00000511118ENST00000511450ENSG00000238835ENST00000459004ENSG00000243385ENST00000468914ENSG00000251552ENST00000513804
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005TL_0001ENSDARG00000010732ENSDART00000024644ENSDARG00000035914ENSDART00000089965ENSDART00000138099CIL_0005TL_0002ENSG00000152422ENST00000282268ENST00000338635ENST00000396027ENST00000509268ENST00000511817ENST00000542685ENSG00000174695ENST00000502346ENST00000503892ENST00000511450ENSG00000238835ENST00000459004ENSG00000243385ENST00000468914ENSG00000251552ENST00000513804
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000010732 ENSDART00000024644 N/A N/A N/A 1.080±1.25 N/A N/A 4.158±1.32 24.001±17.03 0.168±0.00 N/A 1.212±0.00 N/A N/A N/A
ENSDARG00000035914 ENSDART00000089965 N/A N/A N/A 10.641±9.21 N/A N/A 19.597±0.09 12.770±0.00 2.842±0.00 N/A 17.264±0.00 N/A N/A N/A
ENSDART00000138099 N/A N/A N/A 8.541±1.64 N/A N/A 1.944±0.00 0.215±0.00 1.356±0.00 N/A N/A N/A N/A N/A
ENSDART00000148293 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000152422 ENST00000282268 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.105±0.00 N/A 0.218±0.00 N/A
ENST00000338635 1.083±0.00 0.967±0.00 N/A 0.473±0.00 1.302±0.24 1.031±0.56 1.276±0.00 1.641±0.00 0.563±0.00 0.999±0.00 N/A 0.317±0.00 0.402±0.00 2.170±1.06
ENST00000396027 0.359±0.00 N/A N/A 0.465±0.00 N/A 0.753±0.00 0.078±0.00 0.179±0.00 0.223±0.00 N/A 0.223±0.00 1.822±1.09 1.344±0.98 5.257±0.00
ENST00000509268 N/A N/A 0.456±0.00 N/A 1.718±0.00 N/A 0.135±0.00 N/A N/A N/A N/A 0.372±0.00 N/A N/A
ENST00000511817 N/A 0.308±0.00 N/A 0.367±0.08 0.441±0.00 N/A 0.379±0.00 0.929±0.00 0.205±0.00 N/A N/A 0.274±0.00 N/A 0.913±0.19
ENST00000542685 0.898±0.00 0.883±0.00 0.048±0.00 0.973±0.00 N/A 0.577±0.00 0.300±0.09 0.150±0.00 0.610±0.32 0.235±0.00 N/A 0.948±0.28 0.267±0.09 1.028±0.00
ENSG00000174695 ENST00000502346 11.584±0.00 7.913±0.00 8.571±0.00 17.933±4.28 11.739±3.17 6.586±1.06 6.777±1.18 9.451±1.09 7.604±0.19 10.114±0.88 2.180±1.22 8.474±1.50 11.108±2.64 7.310±2.66
ENST00000503892 N/A N/A 13.834±0.00 N/A 16.595±0.00 N/A N/A 11.406±0.00 N/A N/A N/A 24.389±12.32 N/A 8.189±0.00
ENST00000504622 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509770 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000511118 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000511450 N/A N/A N/A N/A 4.372±0.00 N/A N/A N/A 4.724±0.00 4.923±0.00 N/A N/A N/A N/A
ENSG00000238835 ENST00000459004 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.226±0.00
ENSG00000243385 ENST00000468914 N/A N/A N/A 0.146±0.00 0.083±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000251552 ENST00000513804 N/A 0.015±0.00 0.273±0.00 0.043±0.00 0.219±0.00 N/A 0.013±0.00 0.014±0.00 0.308±0.00 0.079±0.00 N/A N/A N/A 0.080±0.00

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