C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: retinoblastoma binding protein 4 pseudogene 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000502424 RBBP4P1-001 ENSG00000249485 9606 - 5:14797125-14798400 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000502424
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000502424 0.047±0.00 0.058±0.00 0.196±0.00 0.108±0.00 0.583±0.54 0.108±0.04 0.113±0.06 0.067±0.00 0.499±0.00 0.198±0.06 0.459±0.44 0.197±0.28 0.048±0.01 0.139±0.08

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006MK CIL_0006MK_0003 CGP 5:14664664-14871778

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000102598 Rbbp4-001 protein_coding Mus_musculus 0 1653
ENSMUST00000188426 RP24-459N9.1-001 processed_pseudogene Mus_musculus 0 865
ENSMUST00000140291 Rbbp4-004 processed_transcript Mus_musculus 0 479

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