C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: olfactory receptor, family 7, subfamily E, member 28 pseudogene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000505191 OR7E28P-001 ENSG00000251491 9606 + 2:158862311-158863285 transcribed_unprocessed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastColonTestisENST00000505191
Transcript ID Breast Colon Testis
ENST00000505191 0.237±0.00 0.082±0.00 0.446±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005U5 CIL_0005U5_0001 CGP 2:158456964-158862958
CIL_00083G CIL_00083G_0001 VISTA 2:158622805-159223829
CIL_0007X8 CIL_0007X8_0001 VISTA 2:158652559-159256392
CIL_0008PS CIL_0008PS_0001 VISTA 2:158729476-159332500
CIL_0005U4 CIL_0005U4_0001 CGP 2:158795317-159232659

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000076850 Olfr345-001 protein_coding Mus_musculus 5e-21 106
ENSMUST00000170592 Olfr376-202 protein_coding Mus_musculus 0.000000000001 79
ENSMUST00000078952 Olfr376-201 protein_coding Mus_musculus 0.000000000001 79
ENSMUST00000120401 Olfr376-001 protein_coding Mus_musculus 0.000000000001 79
ENSMUST00000115991 Olfr22-ps1-001 unprocessed_pseudogene Mus_musculus 0.00000000001 75
ENSMUST00000143750 Olfr396-ps1-001 unprocessed_pseudogene Mus_musculus 0.00000000001 75
ENSMUST00000061289 Olfr1356-201 protein_coding Mus_musculus 0.00000000005 73
ENSMUST00000092917 Olfr23-201 protein_coding Mus_musculus 0.0000000006 69
ENSMUST00000121280 Olfr23-001 protein_coding Mus_musculus 0.0000000006 69
ENSMUST00000069790 Olfr378-201 protein_coding Mus_musculus 0.0000000006 69
ENSMUST00000117349 Olfr378-001 protein_coding Mus_musculus 0.0000000006 69
ENSMUST00000079650 Olfr944-201 protein_coding Mus_musculus 0.0000001 62

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