C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000509814 ITGA2-004 ENSG00000164171 9606 + 5:52989440-53090653 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastColonLungENST00000509814
Transcript ID Breast Colon Lung
ENST00000509814 0.974±0.00 1.888±0.00 1.721±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007G1 CIL_0007G1_0002 CGP 5:52989326-53110063

Gene Ontology

GO IDEvidence TypeGO Description
GO:0007155 IEA cell adhesion
GO:0007229 IEA integrin-mediated signaling pathway
GO:0008305 IEA integrin complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000056117 Itga2-201 protein_coding Mus_musculus 0 2318

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