C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein phosphatase, EF-hand calcium binding domain 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000511880 PPEF2-002 ENSG00000156194 9606 - 4:75859864-75902423 nonsense_mediated_decay

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLungMuscleOvaryTestisENST00000511880
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Lung Muscle Ovary Testis
ENST00000511880 0.019±0.00 0.121±0.00 0.052±0.00 0.081±0.00 0.036±0.00 0.027±0.00 0.020±0.00 0.034±0.00 0.003±0.00 0.017±0.00 0.076±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00071K CIL_00071K_0001 CGP 4:75859864-75941051

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000031359 Ppef2-201 protein_coding Mus_musculus 0 933
ENSMUST00000034431 Tmem170-201 protein_coding Mus_musculus 0.0000005 62
ENSMUST00000173269 Neu1-002 retained_intron Mus_musculus 0.000002 60
ENSMUST00000168162 Pdgfra-202 protein_coding Mus_musculus 0.00002 57
ENSMUST00000000476 Pdgfra-201 protein_coding Mus_musculus 0.00002 57
ENSMUST00000156725 Fbxl18-002 retained_intron Mus_musculus 0.0004 53

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