C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000513338 AC138517.4-001 ENSG00000249215 9606 + 5:139494256-139496116 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastHeartKidneyLiverMuscleOvaryPlacentaTestisENST00000513338
Transcript ID Adipose Adrenal Brain Breast Heart Kidney Liver Muscle Ovary Placenta Testis
ENST00000513338 0.028±0.00 0.014±0.00 0.015±0.00 0.015±0.00 0.033±0.00 0.086±0.00 0.006±0.00 0.107±0.00 0.034±0.01 0.041±0.00 0.019±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000548 CIL_000548_0001 CGP 5:139475534-139628433

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000022467 Gm6768-201 protein_coding Mus_musculus 0 1482
ENSMUST00000111994 Ncoa4-003 protein_coding Mus_musculus 0 1476
ENSMUST00000163336 Ncoa4-001 protein_coding Mus_musculus 0 1476
ENSMUST00000168334 Ncoa4-002 nonsense_mediated_decay Mus_musculus 0 1459
ENSMUST00000169722 Ncoa4-004 protein_coding Mus_musculus 0 867
ENSMUST00000168385 Ncoa4-005 protein_coding Mus_musculus 0 664
ENSMUST00000168034 Ncoa4-006 protein_coding Mus_musculus 0 353
ENSMUST00000164341 Ncoa4-008 protein_coding Mus_musculus 0 287

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