C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | sequestosome 1 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000514093  |
SQSTM1-015 |
ENSG00000161011 |
9606 | + |
5:179806408-179825226  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0000XE | CIL_0000XE_0002 | CGP | 5:179797597-179838078 |
| CIL_0000XF | CIL_0000XF_0002 | CGP | 5:179806398-179862173 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0008270 | IEA | zinc ion binding |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000143379
|
Sqstm1-004 | protein_coding | Mus_musculus | 0 | 614 |
|
ENSMUST00000102774
|
Sqstm1-001 | protein_coding | Mus_musculus | 0 | 614 |
|
ENSMUST00000015981
|
Sqstm1-002 | protein_coding | Mus_musculus | 0 | 614 |
|
ENSMUST00000154805
|
Sqstm1-006 | retained_intron | Mus_musculus | 0 | 241 |
|
ENSMUST00000041725
|
Mgat4b-001 | protein_coding | Mus_musculus | 4.00001e-41 | 172 |
