C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000515049 RP11-304F15.5-001 ENSG00000249176 9606 + 17:49939122-49939819 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainPlacentaTestisENST00000515049
Transcript ID Brain Placenta Testis
ENST00000515049 0.100±0.00 0.079±0.01 0.038±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000877 CIL_000877_0001 VISTA 17:49438854-50041456
CIL_0009BV CIL_0009BV_0001 VISTA 17:49438877-50041441
CIL_0007QJ CIL_0007QJ_0001 VISTA 17:49459872-50061823

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000102503 Mrto4-001 protein_coding Mus_musculus 0 691
ENSMUST00000030513 Mrto4-002 protein_coding Mus_musculus 0 673
ENSMUST00000164169 Gm5633-201 processed_pseudogene Mus_musculus 0 501
ENSMUST00000131052 Mrto4-005 processed_transcript Mus_musculus 0 448
ENSMUST00000139749 Mrto4-006 retained_intron Mus_musculus 0 346
ENSMUST00000155257 Mrto4-004 protein_coding Mus_musculus 0 283
ENSMUST00000128239 Mrto4-007 retained_intron Mus_musculus 5.04467e-44 182

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