C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cytochrome P450, family 4, subfamily F, polypeptide 12
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000517734 CYP4F12-004 ENSG00000186204 9606 + 19:15673090-15697143 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartKidneyOvaryPlacentaENST00000517734
Transcript ID Heart Kidney Ovary Placenta
ENST00000517734 0.026±0.00 1.015±0.77 0.665±0.47 0.041±0.01

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000038 ISS very long-chain fatty acid metabolic process
GO:0001676 ISS long-chain fatty acid metabolic process
GO:0003091 ISS renal water homeostasis
GO:0003095 ISS pressure natriuresis
GO:0005506 IEA iron ion binding
GO:0005737 ISS cytoplasm
GO:0005789 TAS endoplasmic reticulum membrane
GO:0006805 TAS xenobiotic metabolic process
GO:0008392 ISS arachidonic acid epoxygenase activity
GO:0016021 IEA integral component of membrane
GO:0016324 ISS apical plasma membrane
GO:0017144 ISS drug metabolic process
GO:0018685 ISS alkane 1-monooxygenase activity
GO:0019369 ISS arachidonic acid metabolic process
GO:0019373 ISS epoxygenase P450 pathway
GO:0020037 IEA heme binding
GO:0030195 ISS negative regulation of blood coagulation
GO:0036101 ISS leukotriene B4 catabolic process
GO:0042360 ISS vitamin E metabolic process
GO:0042371 ISS vitamin K biosynthetic process
GO:0043231 ISS intracellular membrane-bounded organelle
GO:0044281 TAS small molecule metabolic process
GO:0047057 ISS vitamin-K-epoxide reductase (warfarin-sensitive) activity
GO:0050051 ISS leukotriene-B4 20-monooxygenase activity
GO:0055078 ISS sodium ion homeostasis
GO:0055114 ISS oxidation-reduction process
GO:0070330 IEA aromatase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000054174 Cyp4f14-201 protein_coding Mus_musculus 0 416
ENSMUST00000179434 Cyp4f14-202 protein_coding Mus_musculus 0 416
ENSMUST00000008801 Cyp4f15-002 protein_coding Mus_musculus 0 407
ENSMUST00000165061 Cyp4f40-201 protein_coding Mus_musculus 0 401
ENSMUST00000125448 Cyp4f18-002 processed_transcript Mus_musculus 0 394
ENSMUST00000003574 Cyp4f18-001 protein_coding Mus_musculus 0 390
ENSMUST00000137222 Cyp4f13-004 nonsense_mediated_decay Mus_musculus 0 379
ENSMUST00000139353 Cyp4f13-002 protein_coding Mus_musculus 0 379
ENSMUST00000075253 Cyp4f13-001 protein_coding Mus_musculus 0 379
ENSMUST00000165999 Cyp4f17-201 protein_coding Mus_musculus 0 379
ENSMUST00000165515 Cyp4f16-002 nonsense_mediated_decay Mus_musculus 0 363
ENSMUST00000003416 Cyp4f16-003 protein_coding Mus_musculus 0 363
ENSMUST00000169591 Cyp4f16-001 protein_coding Mus_musculus 0 363
ENSMUST00000168346 Cyp4f16-004 retained_intron Mus_musculus 0 351
ENSMUST00000077639 Cyp4f37-201 protein_coding Mus_musculus 0 351
ENSMUST00000168171 Cyp4f15-001 protein_coding Mus_musculus 0 315
ENSMUST00000169252 Cyp4f16-005 nonsense_mediated_decay Mus_musculus 0 303
ENSMUST00000168285 Cyp4f16-009 retained_intron Mus_musculus 0 294
ENSMUST00000170956 Cyp4f16-007 processed_transcript Mus_musculus 0 244
ENSMUST00000141975 Cyp4f18-003 processed_transcript Mus_musculus 0 226
ENSMUST00000163736 Cyp4f16-008 retained_intron Mus_musculus 0 206

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