C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: family with sequence similarity 92, member A1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000518116 FAM92A1-006 ENSG00000188343 9606 + 8:93700614-93729250 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000518116
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000518116 4.106±0.00 3.556±0.00 2.160±0.00 3.147±0.00 1.937±0.00 3.476±0.00 2.656±0.33 9.123±0.00 3.541±0.89 3.023±0.00 1.560±0.00 6.365±0.00 2.317±0.28 20.202±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000108285 Fam92a-001 protein_coding Mus_musculus 0 728
ENSMUST00000177837 Fam92a-201 protein_coding Mus_musculus 0 706
ENSMUST00000087052 Fam92a-002 protein_coding Mus_musculus 0 662
ENSMUST00000154416 Fam92a-007 protein_coding Mus_musculus 0 516
ENSMUST00000152219 Fam92a-005 retained_intron Mus_musculus 0 475
ENSMUST00000126808 Fam92a-004 retained_intron Mus_musculus 0 468
ENSMUST00000126012 Fam92a-006 nonsense_mediated_decay Mus_musculus 0 335
ENSMUST00000172728 Fam92a-008 processed_transcript Mus_musculus 0 241
ENSMUST00000116286 Stk40-201 protein_coding Mus_musculus 0.00004 55
ENSMUST00000127092 Stk40-002 processed_transcript Mus_musculus 0.00004 55

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