C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: C8orf44-SGK3 readthrough
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000519289 C8orf44-SGK3-001 ENSG00000270024 9606 + 8:66667616-66860472 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastHeartLiverLungOvaryENST00000519289
Transcript ID Breast Heart Liver Lung Ovary
ENST00000519289 0.998±0.00 0.255±0.00 0.484±0.00 1.619±0.00 0.363±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003BG CIL_0003BG_0001 CGP 8:66628487-66860472

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001558 TAS regulation of cell growth
GO:0004672 IEA:TAS protein kinase activity
GO:0004674 IEA protein serine/threonine kinase activity
GO:0004713 IEA protein tyrosine kinase activity
GO:0005246 TAS calcium channel regulator activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005768 IEA endosome
GO:0005829 TAS cytosol
GO:0006468 IEA protein phosphorylation
GO:0006950 TAS response to stress
GO:0015459 TAS potassium channel regulator activity
GO:0016772 IEA transferase activity, transferring phosphorus-containing groups
GO:0017080 TAS sodium channel regulator activity
GO:0017081 TAS chloride channel regulator activity
GO:0030334 TAS regulation of cell migration
GO:0031410 IEA cytoplasmic vesicle
GO:0034220 TAS ion transmembrane transport
GO:0035091 IEA phosphatidylinositol binding
GO:0042127 TAS regulation of cell proliferation
GO:0051090 TAS regulation of sequence-specific DNA binding transcription factor activity
GO:0055085 TAS transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000097826 Sgk3-009 protein_coding Mus_musculus 0 2294
ENSMUST00000171265 Sgk3-008 protein_coding Mus_musculus 0 2294
ENSMUST00000168907 Sgk3-001 protein_coding Mus_musculus 0 2294
ENSMUST00000166384 Sgk3-004 protein_coding Mus_musculus 0 2294
ENSMUST00000188298 Sgk3-007 nonsense_mediated_decay Mus_musculus 0 2041
ENSMUST00000188782 Sgk3-002 nonsense_mediated_decay Mus_musculus 0 1334
ENSMUST00000188738 Sgk3-006 nonsense_mediated_decay Mus_musculus 0 1332
ENSMUST00000189050 Sgk3-013 retained_intron Mus_musculus 0 449
ENSMUST00000188486 Sgk3-012 retained_intron Mus_musculus 0 440
ENSMUST00000191338 Sgk3-010 retained_intron Mus_musculus 0 219
ENSMUST00000188830 Sgk3-014 processed_transcript Mus_musculus 1e-35 156
ENSDART00000066638 grk4-201 protein_coding Danio_rerio 0.00005 55
ENSDART00000128330 grk4-203 protein_coding Danio_rerio 0.00005 55
ENSDART00000103412 grk4-202 protein_coding Danio_rerio 0.00005 55

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