C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: eukaryotic translation initiation factor 5A-like 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000520547 EIF5AL1-001 ENSG00000253626 9606 + 10:79512601-79516440 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000520547
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000520547 0.257±0.00 0.211±0.00 0.052±0.00 0.103±0.08 0.027±0.00 0.121±0.10 0.147±0.13 0.319±0.17 0.078±0.04 0.220±0.20 0.174±0.15 0.074±0.02 0.140±0.13 9.894±7.79

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007WJ CIL_0007WJ_0001 VISTA 10:78920559-79524285

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003723 IEA RNA binding
GO:0003746 IEA translation elongation factor activity
GO:0005643 IEA nuclear pore
GO:0005783 IEA endoplasmic reticulum
GO:0006452 IEA translational frameshifting
GO:0008612 IEA peptidyl-lysine modification to peptidyl-hypusine
GO:0015031 IEA protein transport
GO:0043022 IEA ribosome binding
GO:0045901 IEA positive regulation of translational elongation
GO:0045905 IEA positive regulation of translational termination
GO:0051028 IEA mRNA transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000108613 Eif5a-001 protein_coding Mus_musculus 0 1432
ENSMUST00000071026 Eif5a-012 protein_coding Mus_musculus 0 1411
ENSMUST00000070996 Eif5a-011 protein_coding Mus_musculus 0 1411
ENSMUST00000108612 Eif5a-005 protein_coding Mus_musculus 0 1411
ENSMUST00000164359 Eif5a-201 protein_coding Mus_musculus 0 1408
ENSMUST00000043419 Eif5a-002 protein_coding Mus_musculus 0 1408
ENSMUST00000108611 Eif5a-006 protein_coding Mus_musculus 0 1408
ENSMUST00000108610 Eif5a-007 protein_coding Mus_musculus 0 1408
ENSMUST00000108609 Eif5a-004 protein_coding Mus_musculus 0 1088
ENSMUST00000108608 Eif5a-003 protein_coding Mus_musculus 0 1062
ENSMUST00000108607 Eif5a-008 protein_coding Mus_musculus 0 1061
ENSMUST00000152589 Eif5a-009 protein_coding Mus_musculus 0 776
ENSMUST00000135410 Eif5al3-ps-001 processed_pseudogene Mus_musculus 0 675
ENSMUST00000119095 Gm14016-001 processed_pseudogene Mus_musculus 0 623
ENSMUST00000153652 Eif5a-010 protein_coding Mus_musculus 0 512

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