C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: eukaryotic translation initiation factor 5A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000108608 Eif5a-003 ENSMUSG00000078812 10090 - 11:69917087-69921064 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000108608
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000108608 105.359±12.06 95.318±0.00 72.079±0.00 74.902±22.27 100.943±3.00 61.895±4.41 79.767±7.41 175.159±148.13 71.861±10.13 69.813±8.22 106.028±38.02 157.369±78.98 108.939±15.55

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003746 IEA translation elongation factor activity
GO:0005634 IDA nucleus
GO:0005643 IEA nuclear pore
GO:0005737 IDA cytoplasm
GO:0005783 IEA endoplasmic reticulum
GO:0006452 IEA translational frameshifting
GO:0008612 IEA peptidyl-lysine modification to peptidyl-hypusine
GO:0015031 IEA protein transport
GO:0043022 IEA ribosome binding
GO:0043065 IDA positive regulation of apoptotic process
GO:0045901 IEA positive regulation of translational elongation
GO:0045905 IEA positive regulation of translational termination
GO:0051028 IEA mRNA transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000336452 EIF5A-002 protein_coding Homo_sapiens 0 1083
ENST00000336458 EIF5A-001 protein_coding Homo_sapiens 0 1085
ENST00000355068 EIF5A-003 retained_intron Homo_sapiens 0 327
ENST00000416016 EIF5A-006 protein_coding Homo_sapiens 0 1083
ENST00000419711 EIF5A-004 protein_coding Homo_sapiens 0 1085
ENST00000441206 EIF5AP4-001 processed_pseudogene Homo_sapiens 0 760
ENST00000520547 EIF5AL1-001 protein_coding Homo_sapiens 0 1062
ENST00000570780 GPS2-006 protein_coding Homo_sapiens 0 224
ENST00000571955 EIF5A-005 protein_coding Homo_sapiens 0 1083
ENST00000572815 EIF5A-011 protein_coding Homo_sapiens 0 717
ENST00000573542 EIF5A-009 protein_coding Homo_sapiens 0 1085
ENST00000573714 EIF5A-010 protein_coding Homo_sapiens 0 787
ENST00000575001 EIF5A-008 retained_intron Homo_sapiens 0 327
ENST00000576930 EIF5A-007 protein_coding Homo_sapiens 0 1083
ENST00000585668 EIF5AP2-001 processed_pseudogene Homo_sapiens 0 651
ENST00000589460 EIF5AP3-001 processed_pseudogene Homo_sapiens 0 536

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