C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: platelet-derived growth factor receptor, beta polypeptide
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000520579 PDGFRB-002 ENSG00000113721 9606 - 5:150115727-150155859 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryENST00000520579
Transcript ID Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary
ENST00000520579 1.639±0.00 0.434±0.00 5.777±0.00 1.003±0.00 1.479±0.00 0.558±0.00 2.847±0.00 5.180±0.00 2.462±0.00 3.732±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00091Q CIL_00091Q_0001 VISTA 5:150006686-150608670

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000115274 Pdgfrb-002 protein_coding Mus_musculus 0 2671
ENSMUST00000025522 Pdgfrb-001 protein_coding Mus_musculus 0 2671

Loading