C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Lipid phosphate phosphatase-related protein type 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000520876 LPPR3-001 ENSG00000129951 9606 - 19:812488-821977 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonKidneyLiverLungOvaryPlacentaTestisENST00000520876
Transcript ID Adipose Brain Breast Colon Kidney Liver Lung Ovary Placenta Testis
ENST00000520876 0.063±0.00 3.953±1.72 0.366±0.00 0.125±0.00 0.112±0.00 0.023±0.00 9.577±0.00 2.326±2.90 0.075±0.00 2.229±1.37

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008XG CIL_0008XG_0001 VISTA 19:477571-1083531
CIL_00008B CIL_00008B_0001 CGP 19:797075-821977

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0008195 IEA phosphatidate phosphatase activity
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0016311 IEA dephosphorylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000092325 BC005764-001 protein_coding Mus_musculus 0 1485
ENSMUST00000167250 BC005764-002 protein_coding Mus_musculus 0 1229
ENSMUST00000166057 BC005764-004 retained_intron Mus_musculus 0 1105
ENSMUST00000113452 BC005764-003 retained_intron Mus_musculus 0 1105
ENSMUST00000165601 BC005764-005 protein_coding Mus_musculus 0 819
ENSMUST00000167897 BC005764-009 protein_coding Mus_musculus 0 300
ENSMUST00000170910 BC005764-010 retained_intron Mus_musculus 0 278

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