C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000521192 RP11-863K10.4-001 ENSG00000233170 9606 - 8:37747338-37748004 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000521192
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000521192 0.071±0.00 0.768±0.00 0.956±0.00 0.927±0.14 0.568±0.04 0.212±0.06 0.341±0.18 0.855±0.22 0.724±0.32 0.350±0.22 0.675±0.31 0.399±0.26 0.492±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000802 CIL_000802_0001 VISTA 8:37337791-37938686
CIL_0009C5 CIL_0009C5_0001 VISTA 8:37525567-38127835
CIL_0007QT CIL_0007QT_0001 VISTA 8:37525572-38127829
CIL_0002IU CIL_0002IU_0001 CGP 8:37695751-37759101
CIL_0002IV CIL_0002IV_0001 CGP 8:37736599-37779767

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000115248 C330007P06Rik-201 protein_coding Mus_musculus 0 883
ENSMUST00000047486 C330007P06Rik-001 protein_coding Mus_musculus 0 883
ENSMUST00000062242 Gm8181-201 processed_pseudogene Mus_musculus 0 872
ENSMUST00000115249 C330007P06Rik-002 protein_coding Mus_musculus 0 808
ENSMUST00000127966 C330007P06Rik-005 retained_intron Mus_musculus 0 459
ENSMUST00000150873 C330007P06Rik-004 retained_intron Mus_musculus 0 351
ENSMUST00000143544 C330007P06Rik-003 processed_transcript Mus_musculus 0 351

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