C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RIKEN cDNA C330007P06 gene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000115248 C330007P06Rik-201 ENSMUSG00000006423 10090 - X:36848543-36864246 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000115248
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000115248 8.089±1.50 4.895±1.63 8.403±0.41 4.219±0.53 6.222±1.25 2.261±0.68 3.169±0.46 5.585±1.34 5.635±1.10 8.596±2.06 3.498±0.52 4.186±3.16 5.781±2.39 0.847±0.57

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001UI CIL_0001UI_0002 CGP X:36795651-36874111
CIL_0004S7 CIL_0004S7_0002 CGP X:36823737-36884215

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000074630 C5HXorf56-201 protein_coding Danio_rerio 0 348
ENST00000320339 CXorf56-003 protein_coding Homo_sapiens 0 797
ENST00000469448 CXorf56-004 processed_transcript Homo_sapiens 0 357
ENST00000521192 RP11-863K10.4-001 processed_pseudogene Homo_sapiens 0 883
ENST00000536133 CXorf56-201 protein_coding Homo_sapiens 0 571

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