C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: potassium voltage-gated channel, delayed-rectifier, subfamily S, member 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000521839 KCNS2-003 ENSG00000156486 9606 + 8:98427531-98432148 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000521839
Transcript ID Bladder Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000521839 0.101±0.00 0.108±0.10 0.237±0.12 0.037±0.02 0.094±0.00 0.096±0.09 0.070±0.00 0.014±0.00 0.319±0.16 0.566±0.46 0.030±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008YL CIL_0008YL_0001 VISTA 8:98116253-98717204

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005216 IEA ion channel activity
GO:0005251 IBA delayed rectifier potassium channel activity
GO:0005515 IEA protein binding
GO:0005886 TAS plasma membrane
GO:0006811 IEA ion transport
GO:0007268 TAS synaptic transmission
GO:0008076 IEA voltage-gated potassium channel complex
GO:0016020 IEA membrane
GO:0034765 IEA regulation of ion transmembrane transport
GO:0051260 IEA protein homooligomerization
GO:0055085 IEA transmembrane transport
GO:0071805 IEA potassium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000072868 Kcns2-201 protein_coding Mus_musculus 0 2097
ENSMUST00000055673 Kcns3-201 protein_coding Mus_musculus 1e-32 147
ENSMUST00000164495 Kcns3-202 protein_coding Mus_musculus 1e-32 147

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