C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: mitochondrial transcription termination factor 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000522822 MTERF3-003 ENSG00000156469 9606 - 8:96239424-96257275 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalColonLungMuscleOvaryPlacentaENST00000522822
Transcript ID Adipose Adrenal Colon Lung Muscle Ovary Placenta
ENST00000522822 0.907±0.00 1.456±0.00 0.412±0.00 1.177±0.00 1.545±0.00 1.269±0.00 0.995±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000080 CIL_000080_0002 CGP 8:96225920-96261610
CIL_0006SY CIL_0006SY_0001 CGP 8:96239398-96336995

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003690 IEA double-stranded DNA binding
GO:0005739 IDA:IEA mitochondrion
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0044212 IDA transcription regulatory region DNA binding
GO:0045892 IMP negative regulation of transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000021991 Mterfd1-001 protein_coding Mus_musculus 0 994
ENSMUST00000173158 Mterfd1-002 nonsense_mediated_decay Mus_musculus 0 961
ENSMUST00000174134 Mterfd1-011 processed_transcript Mus_musculus 0 580

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