C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000523057 CTC-308K20.3-001 ENSG00000253785 9606 + 5:172975511-172976374 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonLungOvaryPlacentaTestisENST00000523057
Transcript ID Adrenal Brain Breast Colon Lung Ovary Placenta Testis
ENST00000523057 0.053±0.00 0.013±0.00 0.013±0.00 0.012±0.00 0.059±0.00 0.018±0.00 0.022±0.00 0.021±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008KN CIL_0008KN_0001 VISTA 5:172471670-173074006
CIL_000915 CIL_000915_0001 VISTA 5:172905793-173506594
CIL_0008HF CIL_0008HF_0001 VISTA 5:172963494-173565311

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000020286 Ppa1-001 protein_coding Mus_musculus 0 933
ENSMUST00000119348 Gm13500-001 processed_pseudogene Mus_musculus 0 599

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