C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: predicted gene 13500
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000119348 Gm13500-001 ENSMUSG00000081173 10090 + 2:51231987-51232810 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainPlacentaENSMUST00000119348
Transcript ID Brain Placenta
ENSMUST00000119348 0.010±0.00 0.024±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008JE CIL_0008JE_0002 VISTA 2:50669347-51272438

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000373230 PPA1-004 nonsense_mediated_decay Homo_sapiens 0 396
ENST00000373232 PPA1-001 protein_coding Homo_sapiens 0 682
ENST00000393779 AC104297.1-001 processed_pseudogene Homo_sapiens 0 558
ENST00000523057 CTC-308K20.3-001 processed_pseudogene Homo_sapiens 0 599
ENST00000610026 PPA1-005 retained_intron Homo_sapiens 0 255

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