C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: potassium voltage-gated channel, Shab-related subfamily, member 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000523207 KCNB2-001 ENSG00000182674 9606 + 8:72537391-72938349 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonKidneyLiverLungOvaryPlacentaTestisENST00000523207
Transcript ID Adrenal Bladder Brain Breast Colon Kidney Liver Lung Ovary Placenta Testis
ENST00000523207 0.102±0.00 0.035±0.00 1.656±0.52 0.155±0.07 0.018±0.01 0.024±0.00 0.262±0.00 0.048±0.00 0.023±0.01 0.008±0.00 0.281±0.18

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005BY CIL_0005BY_0002 CGP 8:72019917-72938349
CIL_0003GB CIL_0003GB_0001 CGP 8:72537391-73048122

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005216 IEA ion channel activity
GO:0005249 IEA voltage-gated potassium channel activity
GO:0005251 TAS delayed rectifier potassium channel activity
GO:0005515 IEA protein binding
GO:0005886 TAS plasma membrane
GO:0006811 IEA ion transport
GO:0006813 TAS:IEA potassium ion transport
GO:0006940 TAS regulation of smooth muscle contraction
GO:0007268 TAS synaptic transmission
GO:0008076 IEA voltage-gated potassium channel complex
GO:0016020 IEA membrane
GO:0034765 IEA regulation of ion transmembrane transport
GO:0051260 IEA protein homooligomerization
GO:0055085 IEA transmembrane transport
GO:0071805 IEA potassium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000175681 Kcnb2-002 protein_coding Mus_musculus 0 3371
ENSMUST00000170146 Kcnb2-001 protein_coding Mus_musculus 0 3155

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