C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ring finger protein 5, E3 ubiquitin protein ligase pseudogene 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000524091 RNF5P1-001 ENSG00000253570 9606 - 8:38600661-38601200 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastColonHeartKidneyMuscleOvaryPlacentaENST00000524091
Transcript ID Adipose Breast Colon Heart Kidney Muscle Ovary Placenta
ENST00000524091 8.445±0.00 10.069±0.00 10.008±0.00 0.068±0.00 0.097±0.00 0.082±0.00 0.229±0.01 2.830±0.45

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008NR CIL_0008NR_0001 VISTA 8:38140056-38746180
CIL_0008SM CIL_0008SM_0001 VISTA 8:38252496-38854674
CIL_0008H7 CIL_0008H7_0001 VISTA 8:38253282-38854976
CIL_0008D9 CIL_0008D9_0001 VISTA 8:38350004-38951124

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000015622 Rnf5-001 protein_coding Mus_musculus 0 723
ENSMUST00000174475 Rnf5-003 retained_intron Mus_musculus 0 303

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