C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: developing brain homeobox 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000524983 DBX1-001 ENSG00000109851 9606 - 11:20156155-20160613 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; TestisENST00000524983
Transcript ID Testis
ENST00000524983 0.163±0.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004AW CIL_0004AW_0002 CGP 11:19350724-20160613
CIL_0004AP CIL_0004AP_0002 CGP 11:20156155-20383783

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005634 IEA nucleus
GO:0006357 IEA regulation of transcription from RNA polymerase II promoter
GO:0021521 IEA ventral spinal cord interneuron specification
GO:0043565 IEA sequence-specific DNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000032717 Dbx1-001 protein_coding Mus_musculus 0 976

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