C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: serpin peptidase inhibitor, clade H (heat shock protein 47), member 1, (collagen binding protein 1)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000525876 SERPINH1-009 ENSG00000149257 9606 + 11:75567782-75572782 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonHeartLiverLungENST00000525876
Transcript ID Brain Breast Colon Heart Liver Lung
ENST00000525876 0.112±0.00 3.691±0.00 0.817±0.00 0.579±0.00 1.391±0.00 4.055±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008NG CIL_0008NG_0001 VISTA 11:75253021-75855707
CIL_0001SV CIL_0001SV_0002 CGP 11:75434640-75572783

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005615 IEA extracellular space

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000094154 Serpinh1-201 protein_coding Mus_musculus 0 909
ENSMUST00000169437 Serpinh1-202 protein_coding Mus_musculus 0 909

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