C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000527548 FAU-008 ENSG00000149806 9606 - 11:65120631-65122113 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000527548
Transcript ID Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000527548 14.022±0.00 37.627±17.77 20.554±0.00 91.399±66.25 50.735±43.72 72.030±50.10 93.268±55.62 281.755±256.00 116.577±73.47 562.199±612.66 892.705±214.01 79.884±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000184 TAS nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0002227 IDA innate immune response in mucosa
GO:0003723 TAS RNA binding
GO:0003735 IEA:IDA structural constituent of ribosome
GO:0005515 IEA protein binding
GO:0005575 ND cellular_component
GO:0005615 IDA extracellular space
GO:0005622 IEA intracellular
GO:0005829 TAS cytosol
GO:0005840 IEA ribosome
GO:0006412 IEA:IC translation
GO:0006413 TAS translational initiation
GO:0006414 TAS translational elongation
GO:0006415 TAS translational termination
GO:0006614 TAS SRP-dependent cotranslational protein targeting to membrane
GO:0008150 ND biological_process
GO:0010467 TAS gene expression
GO:0015935 IDA small ribosomal subunit
GO:0016032 TAS viral process
GO:0016070 TAS RNA metabolic process
GO:0016071 TAS mRNA metabolic process
GO:0019058 TAS viral life cycle
GO:0019083 TAS viral transcription
GO:0019731 IDA antibacterial humoral response
GO:0022627 IDA cytosolic small ribosomal subunit
GO:0044267 TAS cellular protein metabolic process
GO:0044822 IDA poly(A) RNA binding
GO:0050830 IDA defense response to Gram-positive bacterium

Homologs

No Homologs available.

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