C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: heat shock transcription factor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000528838 HSF1-001 ENSG00000185122 9606 + 8:144291598-144314722 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000528838
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000528838 27.458±0.00 19.542±0.00 7.372±4.65 28.589±0.00 56.514±0.00 33.545±32.08 14.247±11.64 8.284±5.07 23.906±22.70 71.235±63.42 39.313±17.67 41.267±17.46 50.450±10.57

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007SS CIL_0007SS_0001 VISTA 8:143880613-144482307
CIL_00064A CIL_00064A_0002 CGP 8:144266560-144314722
CIL_00026U CIL_00026U_0001 CGP 8:144291591-144326910

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 IDA negative regulation of transcription from RNA polymerase II promoter
GO:0000978 IDA RNA polymerase II core promoter proximal region sequence-specific DNA binding
GO:0001078 IDA RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription
GO:0001162 IDA RNA polymerase II intronic transcription regulatory region sequence-specific DNA binding
GO:0001701 IEA in utero embryonic development
GO:0001892 IEA embryonic placenta development
GO:0003677 IEA DNA binding
GO:0003682 IEA chromatin binding
GO:0003700 IEA:TAS sequence-specific DNA binding transcription factor activity
GO:0005515 IPI protein binding
GO:0005634 IDA:IEA nucleus
GO:0005737 IDA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006468 IEA protein phosphorylation
GO:0006952 IEA defense response
GO:0007143 IEA female meiotic division
GO:0007283 IEA spermatogenesis
GO:0008285 IEA negative regulation of cell proliferation
GO:0009408 IEA response to heat
GO:0032496 IEA response to lipopolysaccharide
GO:0032720 IEA negative regulation of tumor necrosis factor production
GO:0034605 IDA cellular response to heat
GO:0040018 IEA positive regulation of multicellular organism growth
GO:0043234 IEA protein complex
GO:0043565 IEA sequence-specific DNA binding
GO:0045120 IEA pronucleus
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter
GO:0060136 IEA embryonic process involved in female pregnancy
GO:0090231 IEA regulation of spindle checkpoint

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000072838 Hsf1-201 protein_coding Mus_musculus 0 1531

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