C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: sodium channel, voltage-gated, type IV, beta subunit
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000529878 SCN4B-004 ENSG00000177098 9606 - 11:118136961-118152888 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002BW CIL_0002BW_0002 CGP 11:118077012-118152888

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001518 IDA voltage-gated sodium channel complex
GO:0005248 IDA voltage-gated sodium channel activity
GO:0006814 IDA sodium ion transport
GO:0010765 IDA positive regulation of sodium ion transport
GO:0014704 ISS intercalated disc
GO:0017080 IDA sodium channel regulator activity
GO:0031226 IDA intrinsic component of plasma membrane
GO:0035725 IDA sodium ion transmembrane transport
GO:0044325 IPI ion channel binding
GO:0060048 IMP cardiac muscle contraction
GO:0060307 IMP regulation of ventricular cardiac muscle cell membrane repolarization
GO:0086002 IMP cardiac muscle cell action potential involved in contraction
GO:0086006 IMP voltage-gated sodium channel activity involved in cardiac muscle cell action potential
GO:0086012 IMP membrane depolarization during cardiac muscle cell action potential
GO:0086067 IMP AV node cell to bundle of His cell communication
GO:0086091 IMP regulation of heart rate by cardiac conduction
GO:2000649 IDA regulation of sodium ion transmembrane transporter activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000060125 Scn4b-001 protein_coding Mus_musculus 0 215

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