C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: forkhead box R1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000531539 FOXR1-002 ENSG00000176302 9606 + 11:118971712-118981264 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainColonOvaryTestisENST00000531539
Transcript ID Adrenal Brain Colon Ovary Testis
ENST00000531539 0.072±0.00 0.086±0.00 0.047±0.00 0.058±0.00 0.305±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00021U CIL_00021U_0002 CGP 11:118971707-119015791

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0043565 IEA sequence-specific DNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000098837 Foxr1-201 protein_coding Mus_musculus 0 303

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