C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATPase, aminophospholipid transporter, class I, type 8B, member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000536015 ATP8B1-201 ENSG00000081923 9606 - 18:57646429-57803095 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaENST00000536015
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta
ENST00000536015 1.074±0.00 4.685±0.00 0.890±0.00 0.488±0.00 4.112±2.45 34.437±0.00 0.365±0.00 4.936±0.00 3.814±1.90 5.571±0.00 2.294±1.05 1.275±0.60

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006OE CIL_0006OE_0001 CGP 18:57600656-57803101
CIL_0006OF CIL_0006OF_0001 CGP 18:57646426-58401540

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0000287 IEA magnesium ion binding
GO:0004012 IEA:TAS phospholipid-translocating ATPase activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005783 IDA endoplasmic reticulum
GO:0005794 IDA Golgi apparatus
GO:0005886 IDA plasma membrane
GO:0005887 NAS integral component of plasma membrane
GO:0006855 IDA drug transmembrane transport
GO:0007605 IEA sensory perception of sound
GO:0008206 IEA bile acid metabolic process
GO:0015721 NAS bile acid and bile salt transport
GO:0015914 IEA phospholipid transport
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0016324 IDA apical plasma membrane
GO:0019829 IEA cation-transporting ATPase activity
GO:0021650 IEA vestibulocochlear nerve formation
GO:0031526 IEA brush border membrane
GO:0032420 IEA stereocilium
GO:0032534 IMP regulation of microvillus assembly
GO:0034220 TAS ion transmembrane transport
GO:0045332 IEA:IDA phospholipid translocation
GO:0045892 IMP negative regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding
GO:0055085 TAS transmembrane transport
GO:0060119 IEA inner ear receptor cell development
GO:0098655 IEA cation transmembrane transport
GO:1901612 IEA cardiolipin binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000025482 Atp8b1-201 protein_coding Mus_musculus 0 4348
ENSDART00000086492 atp8b1-201 protein_coding Danio_rerio 0 272
ENSDART00000137844 atp8b1-001 protein_coding Danio_rerio 0 272
ENSMUST00000107937 Atp8b5-005 nonsense_mediated_decay Mus_musculus 0 257
ENSMUST00000107942 Atp8b5-001 protein_coding Mus_musculus 0 257

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