C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: WAS protein family, member 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000536657 WASF2-002 ENSG00000158195 9606 - 1:27408197-27490051 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonKidneyLiverLungMuscleOvaryENST00000536657
Transcript ID Bladder Brain Breast Colon Kidney Liver Lung Muscle Ovary
ENST00000536657 7.329±0.00 1.198±0.00 3.633±0.00 5.084±0.00 1.762±0.00 3.894±0.00 7.900±0.00 0.962±0.00 4.908±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008WN CIL_0008WN_0001 VISTA 1:27203963-27805666

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003779 IEA actin binding
GO:0005515 IPI protein binding
GO:0005622 IDA intracellular
GO:0005829 TAS cytosol
GO:0007188 TAS adenylate cyclase-modulating G-protein coupled receptor signaling pathway
GO:0010592 IMP positive regulation of lamellipodium assembly
GO:0015629 TAS actin cytoskeleton
GO:0030027 IDA lamellipodium
GO:0030036 IEA actin cytoskeleton organization
GO:0031209 IMP SCAR complex
GO:0032403 IDA protein complex binding
GO:0038096 TAS Fc-gamma receptor signaling pathway involved in phagocytosis
GO:0045087 TAS innate immune response
GO:0051497 IMP negative regulation of stress fiber assembly
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000084241 Wasf2-001 protein_coding Mus_musculus 0 1190
ENSMUST00000105912 Wasf2-002 protein_coding Mus_musculus 0 1149
ENSMUST00000138831 Wasf2-003 protein_coding Mus_musculus 0 433
ENSMUST00000136637 Wasf2-006 processed_transcript Mus_musculus 0 394
ENSMUST00000123578 Wasf2-005 processed_transcript Mus_musculus 0 261
ENSMUST00000136132 Wasf2-004 processed_transcript Mus_musculus 9.99967e-42 174

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