C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: WAS protein family, member 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000084241 Wasf2-001 ENSMUSG00000028868 10090 + 4:133130505-133199756 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000084241
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000084241 30.370±0.91 22.801±2.80 21.811±1.90 5.313±2.37 27.621±11.49 31.687±1.67 11.995±1.51 15.430±0.38 8.289±2.53 33.968±15.03 3.643±0.88 27.619±8.77 12.323±8.29 6.083±0.30

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008WN CIL_0008WN_0002 VISTA 4:132816592-133418424

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001525 IMP angiogenesis
GO:0001667 IMP ameboidal cell migration
GO:0001726 IDA ruffle
GO:0003779 IEA actin binding
GO:0005515 IPI protein binding
GO:0005622 ISA intracellular
GO:0005769 IDA early endosome
GO:0005856 IEA cytoskeleton
GO:0005911 IDA cell-cell junction
GO:0006897 IDA endocytosis
GO:0006928 IMP cellular component movement
GO:0010592 IEA positive regulation of lamellipodium assembly
GO:0016601 IMP Rac protein signal transduction
GO:0030027 ISA lamellipodium
GO:0030032 IMP lamellipodium assembly
GO:0030036 IMP actin cytoskeleton organization
GO:0030048 IMP actin filament-based movement
GO:0031209 IEA SCAR complex
GO:0032403 IEA protein complex binding
GO:0035855 IMP megakaryocyte development
GO:0051497 IEA negative regulation of stress fiber assembly
GO:0070062 IEA extracellular vesicular exosome
GO:0072673 IMP lamellipodium morphogenesis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000444248 WASF4P-001 processed_pseudogene Homo_sapiens 0 1600
ENST00000536657 WASF2-002 protein_coding Homo_sapiens 0 1190
ENST00000618852 WASF2-001 protein_coding Homo_sapiens 0 1949

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