C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: integrin, beta 8
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000537992 ITGB8-005 ENSG00000105855 9606 + 7:20330702-20410330 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastColonLiverLungOvaryENST00000537992
Transcript ID Bladder Breast Colon Liver Lung Ovary
ENST00000537992 2.663±0.00 1.191±0.00 0.694±0.00 1.599±0.00 1.248±0.00 1.069±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004872 IEA receptor activity
GO:0005886 TAS plasma membrane
GO:0007155 TAS cell adhesion
GO:0007229 IEA integrin-mediated signaling pathway
GO:0008305 TAS integrin complex
GO:0009986 IDA cell surface
GO:0010628 IMP positive regulation of gene expression
GO:0010629 IMP negative regulation of gene expression
GO:0030198 TAS extracellular matrix organization
GO:0034686 IDA integrin alphav-beta8 complex
GO:0051216 IMP cartilage development
GO:0060674 TAS placenta blood vessel development
GO:0070062 IDA extracellular vesicular exosome
GO:1990430 IDA extracellular matrix protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000026360 Itgb8-001 protein_coding Mus_musculus 0 2534
ENSMUST00000151023 Itgb8-003 retained_intron Mus_musculus 0 1033
ENSMUST00000137804 Itgb8-002 retained_intron Mus_musculus 0 289

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