C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: integrin beta 8
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000026360 Itgb8-001 ENSMUSG00000025321 10090 - 12:119158022-119238802 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000026360
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000026360 0.720±0.65 0.523±0.24 0.460±0.00 3.113±0.23 0.532±0.16 0.185±0.09 0.274±0.02 11.726±0.64 0.021±0.01 0.317±0.07 0.097±0.02 0.483±0.23 0.119±0.14 0.038±0.02

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001573 IMP ganglioside metabolic process
GO:0004872 IEA receptor activity
GO:0005102 IEA receptor binding
GO:0007160 IEA cell-matrix adhesion
GO:0007229 IEA integrin-mediated signaling pathway
GO:0007275 IEA multicellular organismal development
GO:0008305 IEA integrin complex
GO:0009986 IEA cell surface
GO:0010628 IEA positive regulation of gene expression
GO:0010629 IEA negative regulation of gene expression
GO:0034686 IEA integrin alphav-beta8 complex
GO:0051216 IEA cartilage development
GO:0070062 IEA extracellular vesicular exosome
GO:1990430 IEA extracellular matrix protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000222573 ITGB8-001 protein_coding Homo_sapiens 0 3027
ENST00000477859 ITGB8-002 retained_intron Homo_sapiens 0 496
ENST00000478974 ITGB8-004 retained_intron Homo_sapiens 0 1855
ENST00000537992 ITGB8-005 protein_coding Homo_sapiens 0 2534

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