C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Mediterranean fever
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000538326 MEFV-007 ENSG00000103313 9606 - 16:3242028-3256627 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastKidneyOvaryENST00000538326
Transcript ID Adrenal Brain Breast Kidney Ovary
ENST00000538326 0.381±0.00 0.081±0.00 0.309±0.00 0.272±0.00 0.117±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00029F CIL_00029F_0002 CGP 16:3222325-3256627
CIL_0001SW CIL_0001SW_0001 CGP 16:3242028-3301401

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003779 IEA actin binding
GO:0005622 IEA intracellular
GO:0006954 IEA inflammatory response
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000034431 Tmem170-201 protein_coding Mus_musculus 0.0000001 64
ENSMUST00000024742 Nfkbie-201 protein_coding Mus_musculus 0.000001 60

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