C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00029F_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000079203-ENSDARG00000090930 CGP 7955 3:60488590-60548970
GeneTranscriptPositionBiotype
ENSDARG00000076807 (zgc:113265)
zgc:113265 		ENSDART00000102030 (zgc:113265-201) 60440657-60462938 protein_coding
ENSDART00000106445 (zgc:113265-202) 60440671-60506298 protein_coding
ENSDART00000153642 (zgc:113265-001) 60440661-60442925 protein_coding
ENSDARG00000079203 (CR352258.1)
Uncharacterized protein 		ENSDART00000109776 (CR352258.1-201) 60488590-60489672 protein_coding
ENSDARG00000090930 (si:ch211-120g10.1)
si:ch211-120g10.1 		ENSDART00000128042 (si:ch211-120g10.1-201) 60536288-60545741 protein_coding
ENSDART00000153247 (si:ch211-120g10.1-001) 60536288-60548970 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_00029F_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000010539-ENSG00000103313 CGP 9606 16:3222325-3256627
GeneTranscriptPositionBiotype
ENSG00000010539 (ZNF200)
zinc finger protein 200 		ENST00000396868 (ZNF200-003) 3222325-3235360 protein_coding
ENST00000396870 (ZNF200-004) 3223336-3235186 protein_coding
ENST00000396871 (ZNF200-002) 3222342-3235457 protein_coding
ENST00000414144 (ZNF200-001) 3222325-3235456 protein_coding
ENST00000431561 (ZNF200-005) 3222345-3235167 protein_coding
ENST00000575285 (ZNF200-007) 3223498-3227805 retained_intron
ENST00000575617 (ZNF200-008) 3233627-3236221 protein_coding
ENST00000575630 (ZNF200-010) 3232431-3234195 retained_intron
ENST00000575948 (ZNF200-006) 3223892-3235070 protein_coding
ENST00000577015 (ZNF200-009) 3234795-3236003 retained_intron
ENSG00000103313 (MEFV)
Mediterranean fever 		ENST00000219596 (MEFV-001) 3242028-3256627 protein_coding
ENST00000339854 (MEFV-010) 3242028-3256627 protein_coding
ENST00000536379 (MEFV-004) 3243141-3256587 protein_coding
ENST00000536980 (MEFV-009) 3242028-3256627 nonsense_mediated_decay
ENST00000537682 (MEFV-006) 3242028-3256627 nonsense_mediated_decay
ENST00000538326 (MEFV-007) 3242028-3256627 nonsense_mediated_decay
ENST00000539145 (MEFV-003) 3243141-3256587 nonsense_mediated_decay
ENST00000539154 (MEFV-005) 3246410-3247967 retained_intron
ENST00000541159 (MEFV-002) 3243141-3256587 protein_coding
ENST00000542898 (MEFV-008) 3242028-3256627 nonsense_mediated_decay
ENST00000570511 (MEFV-015) 3243141-3256587 nonsense_mediated_decay
ENST00000572244 (MEFV-012) 3243141-3256587 nonsense_mediated_decay
ENST00000574583 (MEFV-014) 3243141-3256587 nonsense_mediated_decay
ENST00000576315 (MEFV-013) 3243141-3256587 nonsense_mediated_decay
ENST00000621655 (MEFV-201) 3243141-3256587 protein_coding

Homo sapiens Ensembl (GRCh38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00029F_0001ENSDARG00000076807ENSDART00000102030ENSDART00000106445ENSDART00000153642ENSDARG00000079203ENSDART00000109776ENSDARG00000090930ENSDART00000128042ENSDART00000153247CIL_00029F_0002ENSG00000010539ENST00000396868ENST00000396870ENST00000396871ENST00000414144ENST00000431561ENST00000575285ENST00000575617ENST00000575630ENST00000575948ENST00000577015ENSG00000103313ENST00000219596ENST00000339854ENST00000536379ENST00000536980ENST00000537682ENST00000538326ENST00000539145ENST00000539154ENST00000541159ENST00000542898ENST00000570511ENST00000572244ENST00000574583ENST00000576315ENST00000621655
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00029F_0001ENSDARG00000076807ENSDART00000102030ENSDART00000106445ENSDART00000153642ENSDARG00000079203ENSDART00000109776ENSDARG00000090930ENSDART00000128042ENSDART00000153247CIL_00029F_0002ENSG00000010539ENST00000396868ENST00000396870ENST00000396871ENST00000414144ENST00000431561ENST00000575285ENST00000575948ENSG00000103313ENST00000219596ENST00000339854ENST00000536379ENST00000536980ENST00000537682ENST00000538326ENST00000539154ENST00000541159ENST00000570511ENST00000572244ENST00000574583ENST00000621655
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000076807 ENSDART00000102030 N/A N/A N/A 1.559±0.44 N/A N/A 0.628±0.66 0.408±0.22 0.053±0.00 N/A 1.001±0.00 N/A N/A N/A
ENSDART00000106445 N/A N/A N/A 2.025±0.65 N/A N/A 1.771±0.68 4.498±1.53 0.325±0.00 N/A 0.525±0.00 N/A N/A N/A
ENSDART00000153642 N/A N/A N/A 4.791±3.48 N/A N/A 1.411±0.20 N/A 0.123±0.00 N/A N/A N/A N/A N/A
ENSDARG00000079203 ENSDART00000109776 N/A N/A N/A 1.755±0.00 N/A N/A 1.561±0.00 5.937±0.00 N/A N/A N/A N/A N/A N/A
ENSDARG00000090930 ENSDART00000128042 N/A N/A N/A 5.083±4.34 N/A N/A 1.196±1.05 0.110±0.00 N/A N/A 2.137±0.00 N/A N/A N/A
ENSDART00000153247 N/A N/A N/A 0.979±0.75 N/A N/A 0.753±0.39 N/A 0.047±0.00 N/A 0.427±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000010539 ENST00000396868 N/A N/A N/A 0.262±0.00 N/A N/A 0.385±0.00 N/A 0.352±0.00 N/A 0.194±0.00 N/A N/A 1.744±0.00
ENST00000396870 0.702±0.00 2.249±0.00 0.139±0.00 1.093±0.00 0.685±0.00 0.311±0.00 0.708±0.47 0.575±0.37 0.538±0.06 0.399±0.00 0.571±0.14 1.081±0.28 0.993±0.36 N/A
ENST00000396871 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.113±0.00 N/A N/A N/A N/A
ENST00000414144 N/A N/A N/A N/A N/A N/A N/A 0.491±0.00 0.295±0.00 N/A N/A 0.949±0.20 0.260±0.00 1.823±0.00
ENST00000431561 0.354±0.00 N/A 0.070±0.00 N/A 0.459±0.00 0.533±0.00 N/A 0.893±0.00 N/A N/A N/A 0.517±0.14 0.920±0.23 3.597±2.22
ENST00000575285 0.110±0.00 N/A 0.087±0.00 0.262±0.10 0.213±0.00 N/A 0.099±0.06 0.422±0.00 0.109±0.05 N/A 0.079±0.00 0.157±0.00 N/A 1.100±0.00
ENST00000575617 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000575630 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000575948 N/A N/A N/A N/A 0.496±0.00 0.683±0.08 0.144±0.00 N/A N/A 0.496±0.00 N/A 0.761±0.00 0.351±0.00 4.808±1.19
ENST00000577015 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000103313 ENST00000219596 N/A N/A N/A 0.059±0.00 0.216±0.00 0.091±0.00 0.096±0.00 N/A 0.125±0.00 1.691±0.00 N/A 0.134±0.01 0.163±0.07 N/A
ENST00000339854 N/A N/A 0.028±0.00 0.251±0.00 0.366±0.00 N/A 0.219±0.00 N/A N/A N/A 0.072±0.00 0.099±0.02 0.148±0.00 N/A
ENST00000536379 1.045±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.147±0.00 N/A N/A
ENST00000536980 N/A 0.155±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.300±0.00
ENST00000537682 N/A N/A N/A N/A N/A N/A 0.299±0.00 N/A 0.053±0.00 2.473±0.00 N/A N/A 0.167±0.01 0.318±0.07
ENST00000538326 N/A 0.381±0.00 N/A 0.081±0.00 0.309±0.00 N/A N/A 0.272±0.00 N/A N/A N/A 0.117±0.00 N/A N/A
ENST00000539145 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000539154 N/A 0.266±0.00 N/A 0.195±0.00 0.123±0.00 0.133±0.00 0.062±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000541159 N/A N/A N/A N/A N/A 0.140±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000542898 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000570511 N/A N/A N/A 0.060±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000572244 N/A N/A 0.029±0.00 0.126±0.00 N/A N/A N/A N/A 0.190±0.00 N/A N/A N/A N/A N/A
ENST00000574583 N/A N/A N/A N/A N/A N/A N/A 0.182±0.00 N/A N/A N/A N/A N/A N/A
ENST00000576315 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000621655 N/A N/A N/A N/A N/A 0.145±0.00 N/A N/A N/A N/A N/A N/A N/A N/A

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