C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: HNF1 homeobox A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000538646 HNF1A-015 ENSG00000135100 9606 + 12:120978651-120997882 nonsense_mediated_decay

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00075Z CIL_00075Z_0002 CGP 12:120978543-121016502

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001077 ISS RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription
GO:0003677 IDA:IEA DNA binding
GO:0003700 IDA sequence-specific DNA binding transcription factor activity
GO:0005515 IPI protein binding
GO:0005634 IDA:IEA nucleus
GO:0005737 IDA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006357 IDA regulation of transcription from RNA polymerase II promoter
GO:0030073 IMP insulin secretion
GO:0035623 IMP renal glucose absorption
GO:0042593 IMP glucose homeostasis
GO:0042803 IPI protein homodimerization activity
GO:0043234 IDA protein complex
GO:0044212 IDA transcription regulatory region DNA binding
GO:0045893 IDA:IEA positive regulation of transcription, DNA-templated
GO:0045944 ISS positive regulation of transcription from RNA polymerase II promoter
GO:0046323 IMP glucose import
GO:0046982 IDA protein heterodimerization activity
GO:0046983 IPI protein dimerization activity
GO:0060261 IGI positive regulation of transcription initiation from RNA polymerase II promoter

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000176911 Hnf1a-003 nonsense_mediated_decay Mus_musculus 0 926
ENSMUST00000031535 Hnf1a-001 protein_coding Mus_musculus 0 926
ENSMUST00000176550 Hnf1a-002 nonsense_mediated_decay Mus_musculus 0 662
ENSMUST00000184027 Hnf1a-004 retained_intron Mus_musculus 0 440

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