C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: HNF1 homeobox A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000184027 Hnf1a-004 ENSMUSG00000029556 10090 - 5:114968705-114971094 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeColonKidneyLiverENSMUST00000184027
Transcript ID Adipose Colon Kidney Liver
ENSMUST00000184027 1.531±0.00 17.430±3.07 8.682±1.76 8.108±3.79

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000257555 HNF1A-001 protein_coding Homo_sapiens 0 592
ENST00000400024 HNF1A-002 protein_coding Homo_sapiens 0 551
ENST00000402929 HNF1A-003 retained_intron Homo_sapiens 0 451
ENST00000538626 HNF1A-017 processed_transcript Homo_sapiens 6.99949e-42 174
ENST00000538646 HNF1A-015 nonsense_mediated_decay Homo_sapiens 0 440
ENST00000540108 HNF1A-024 nonsense_mediated_decay Homo_sapiens 0 401
ENST00000541395 HNF1A-023 protein_coding Homo_sapiens 0 407
ENST00000541924 HNF1A-014 nonsense_mediated_decay Homo_sapiens 0 440
ENST00000543427 HNF1A-201 protein_coding Homo_sapiens 0 460
ENST00000544413 HNF1A-025 protein_coding Homo_sapiens 0 403
ENST00000544574 HNF1A-016 nonsense_mediated_decay Homo_sapiens 3.00018e-42 176
ENST00000560968 HNF1A-006 nonsense_mediated_decay Homo_sapiens 0 460
ENST00000617366 HNF1A-203 protein_coding Homo_sapiens 0 460

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