C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phosphate cytidylyltransferase 2, ethanolamine
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000538721 PCYT2-003 ENSG00000185813 9606 - 17:81904343-81911406 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyLiverMuscleOvaryPlacentaTestisENST00000538721
Transcript ID Adipose Brain Breast Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENST00000538721 12.611±0.00 9.752±0.00 14.449±0.00 6.955±4.12 9.547±0.00 12.658±3.10 30.291±0.00 24.118±0.00 20.547±0.00 16.605±5.09 45.290±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004M3 CIL_0004M3_0001 CGP 17:81887844-81900991
CIL_0004M4 CIL_0004M4_0001 CGP 17:81890790-81902905
CIL_0004M5 CIL_0004M5_0001 CGP 17:81900745-81911464
CIL_0004LV CIL_0004LV_0001 CGP 17:81900965-81921323

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0004306 TAS ethanolamine-phosphate cytidylyltransferase activity
GO:0005575 ND cellular_component
GO:0005789 TAS endoplasmic reticulum membrane
GO:0006644 TAS phospholipid metabolic process
GO:0006646 IEA phosphatidylethanolamine biosynthetic process
GO:0008654 TAS phospholipid biosynthetic process
GO:0009058 IEA biosynthetic process
GO:0044281 TAS small molecule metabolic process
GO:0046474 TAS glycerophospholipid biosynthetic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000026129 Pcyt2-001 protein_coding Mus_musculus 0 1423
ENSMUST00000106187 Pcyt2-005 retained_intron Mus_musculus 0 754
ENSMUST00000106188 Pcyt2-002 protein_coding Mus_musculus 0 682
ENSMUST00000126723 Pcyt2-011 processed_transcript Mus_musculus 0 507
ENSMUST00000126148 Pcyt2-003 retained_intron Mus_musculus 0 409
ENSMUST00000124504 Pcyt2-008 retained_intron Mus_musculus 0 387
ENSDART00000063135 pcyt2-001 protein_coding Danio_rerio 0 285
ENSMUST00000145356 Pcyt2-004 retained_intron Mus_musculus 0 276
ENSMUST00000134671 Pcyt2-007 retained_intron Mus_musculus 0 252
ENSMUST00000143502 Pcyt2-009 retained_intron Mus_musculus 0 239
ENSDART00000140987 pcyt2-003 retained_intron Danio_rerio 0 230
ENSMUST00000124468 Pcyt2-006 retained_intron Mus_musculus 0 224
ENSMUST00000160059 Pcyt2-012 retained_intron Mus_musculus 0 193
ENSDART00000140729 pcyt2-002 retained_intron Danio_rerio 1e-19 102

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