C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: phosphate cytidylyltransferase 2, ethanolamine
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000185813 PCYT2 9606 - 17:81900965-81911464 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000331285 PCYT2-006 81904326-81911175 protein_coding
  ENST00000538721 PCYT2-003 81904343-81911406 protein_coding
  ENST00000538936 PCYT2-001 81900965-81911464 protein_coding
  ENST00000570388 PCYT2-005 81904812-81911354 protein_coding
  ENST00000570391 PCYT2-007 81904424-81911267 protein_coding
  ENST00000571105 PCYT2-002 81904367-81911413 protein_coding
  ENST00000571581 PCYT2-011 81906145-81911388 retained_intron
  ENST00000571944 PCYT2-016 81905519-81906248 retained_intron
  ENST00000572157 PCYT2-012 81908919-81911175 protein_coding
  ENST00000572473 PCYT2-008 81908878-81911432 protein_coding
  ENST00000572924 PCYT2-017 81904876-81906177 retained_intron
  ENST00000572995 PCYT2-014 81904651-81907794 protein_coding
  ENST00000573401 PCYT2-004 81906100-81911377 nonsense_mediated_decay
  ENST00000573636 PCYT2-010 81905670-81911410 protein_coding
  ENST00000573927 PCYT2-013 81907786-81911128 protein_coding
  ENST00000574155 PCYT2-015 81905681-81906829 retained_intron
  ENST00000574343 PCYT2-018 81904636-81905676 retained_intron
  ENST00000576343 PCYT2-009 81904898-81911418 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverMuscleOvaryPlacentaTestisENST00000538721ENST00000538936ENST00000570388ENST00000570391ENST00000571105ENST00000573401ENST00000573636
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENST00000538721 12.611±0.00 N/A 9.752±0.00 14.449±0.00 6.955±4.12 9.547±0.00 12.658±3.10 30.291±0.00 24.118±0.00 20.547±0.00 16.605±5.09 45.290±0.00
ENST00000538936 3.440±0.00 N/A 4.739±0.00 6.743±0.00 N/A N/A 4.522±1.81 12.727±0.00 N/A 6.212±0.00 5.764±0.46 N/A
ENST00000570388 N/A 2.516±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000570391 N/A N/A 5.626±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 126.371±68.00
ENST00000571105 N/A N/A 11.550±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 58.914±0.00
ENST00000573401 N/A N/A N/A N/A N/A N/A N/A 3.546±0.00 N/A N/A N/A N/A
ENST00000573636 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 226.050±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004M3 CIL_0004M3_0001 CGP 17:81887844-81900991
CIL_0004M4 CIL_0004M4_0001 CGP 17:81890790-81902905
CIL_0004M5 CIL_0004M5_0001 CGP 17:81900745-81911464
CIL_0004LV CIL_0004LV_0001 CGP 17:81900965-81921323

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0004306 TAS ethanolamine-phosphate cytidylyltransferase activity
GO:0005575 ND cellular_component
GO:0005789 TAS endoplasmic reticulum membrane
GO:0006644 TAS phospholipid metabolic process
GO:0006646 IEA phosphatidylethanolamine biosynthetic process
GO:0008654 TAS phospholipid biosynthetic process
GO:0009058 IEA biosynthetic process
GO:0044281 TAS small molecule metabolic process
GO:0046474 TAS glycerophospholipid biosynthetic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000043003 pcyt2 phosphate cytidylyltransferase 2, ethanolamine protein_coding Danio_rerio
ENSMUSG00000025137 Pcyt2 phosphate cytidylyltransferase 2, ethanolamine protein_coding Mus_musculus

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