C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phosphate cytidylyltransferase 2, ethanolamine
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000538936 PCYT2-001 ENSG00000185813 9606 - 17:81900965-81911464 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastKidneyLiverOvaryPlacentaENST00000538936
Transcript ID Adipose Brain Breast Kidney Liver Ovary Placenta
ENST00000538936 3.440±0.00 4.739±0.00 6.743±0.00 4.522±1.81 12.727±0.00 6.212±0.00 5.764±0.46

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004M3 CIL_0004M3_0001 CGP 17:81887844-81900991
CIL_0004M4 CIL_0004M4_0001 CGP 17:81890790-81902905
CIL_0004M5 CIL_0004M5_0001 CGP 17:81900745-81911464
CIL_0004LV CIL_0004LV_0001 CGP 17:81900965-81921323

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0004306 TAS ethanolamine-phosphate cytidylyltransferase activity
GO:0005575 ND cellular_component
GO:0005789 TAS endoplasmic reticulum membrane
GO:0006644 TAS phospholipid metabolic process
GO:0006646 IEA phosphatidylethanolamine biosynthetic process
GO:0008654 TAS phospholipid biosynthetic process
GO:0009058 IEA biosynthetic process
GO:0044281 TAS small molecule metabolic process
GO:0046474 TAS glycerophospholipid biosynthetic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000106188 Pcyt2-002 protein_coding Mus_musculus 0 1352
ENSMUST00000026129 Pcyt2-001 protein_coding Mus_musculus 0 684
ENSMUST00000106187 Pcyt2-005 retained_intron Mus_musculus 0 682
ENSDART00000063135 pcyt2-001 protein_coding Danio_rerio 0 525
ENSMUST00000126723 Pcyt2-011 processed_transcript Mus_musculus 0 507
ENSMUST00000126148 Pcyt2-003 retained_intron Mus_musculus 0 409
ENSMUST00000124504 Pcyt2-008 retained_intron Mus_musculus 0 387
ENSMUST00000145356 Pcyt2-004 retained_intron Mus_musculus 0 276
ENSMUST00000143502 Pcyt2-009 retained_intron Mus_musculus 0 239
ENSDART00000140987 pcyt2-003 retained_intron Danio_rerio 0 230
ENSMUST00000134671 Pcyt2-007 retained_intron Mus_musculus 0 200
ENSMUST00000160059 Pcyt2-012 retained_intron Mus_musculus 0 193
ENSMUST00000124468 Pcyt2-006 retained_intron Mus_musculus 3e-34 152
ENSDART00000140729 pcyt2-002 retained_intron Danio_rerio 3e-19 102

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