C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: parathyroid hormone-like hormone
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000539239 PTHLH-008 ENSG00000087494 9606 - 12:27958270-27969561 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonHeartKidneyMuscleOvaryPlacentaTestisENST00000539239
Transcript ID Brain Breast Colon Heart Kidney Muscle Ovary Placenta Testis
ENST00000539239 0.598±0.42 0.850±0.00 0.630±0.00 0.096±0.00 0.093±0.00 0.196±0.00 0.537±0.23 1.194±0.60 0.575±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00056D CIL_00056D_0001 CGP 12:27780020-27972705
CIL_00056O CIL_00056O_0001 CGP 12:27958084-28581511

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001501 IDA skeletal system development
GO:0005179 IEA hormone activity
GO:0005576 IEA:TAS extracellular region
GO:0005615 TAS extracellular space
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005794 IDA Golgi apparatus
GO:0007189 IDA adenylate cyclase-activating G-protein coupled receptor signaling pathway
GO:0007267 TAS cell-cell signaling
GO:0007565 TAS female pregnancy
GO:0008285 TAS negative regulation of cell proliferation
GO:0008544 TAS epidermis development
GO:0010468 IDA regulation of gene expression
GO:0030819 IDA positive regulation of cAMP biosynthetic process
GO:0032331 IDA negative regulation of chondrocyte differentiation
GO:0046058 TAS cAMP metabolic process
GO:0051428 IDA peptide hormone receptor binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000052296 Pthlh-001 protein_coding Mus_musculus 0 795

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