C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: ubiquitin specific peptidase 10
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000540269 USP10-002 ENSG00000103194 9606 + 16:84699995-84779922 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonKidneyLungOvaryENST00000540269
Transcript ID Adipose Adrenal Breast Colon Kidney Lung Ovary
ENST00000540269 2.322±0.00 7.133±0.00 7.363±0.00 1.391±0.00 1.324±0.00 0.973±0.00 10.573±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000IC CIL_0000IC_0001 CGP 16:84648525-84779922

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004843 IEA ubiquitin-specific protease activity
GO:0016579 IEA protein deubiquitination
GO:0030330 IEA DNA damage response, signal transduction by p53 class mediator

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000143615 Usp10-004 processed_transcript Mus_musculus 0 508
ENSMUST00000144458 Usp10-002 protein_coding Mus_musculus 0 508
ENSMUST00000108988 Usp10-001 protein_coding Mus_musculus 0 505

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