C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger and SCAN domain containing 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000540894 ZSCAN2-010 ENSG00000176371 9606 + 15:84603901-84623643 nonsense_mediated_decay

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001HN CIL_0001HN_0001 CGP 15:84600986-84654343

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0007275 IEA multicellular organismal development
GO:0007283 IEA spermatogenesis
GO:0030154 IEA cell differentiation
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000044115 Zscan2-001 protein_coding Mus_musculus 0 1986
ENSMUST00000147125 Zscan2-004 protein_coding Mus_musculus 0 1387
ENSMUST00000155128 Zscan2-003 protein_coding Mus_musculus 0 518
ENSMUST00000132163 Zscan2-002 protein_coding Mus_musculus 0 459
ENSMUST00000108705 Zfp286-002 protein_coding Mus_musculus 2e-18 99
ENSMUST00000054654 Zfp286-001 protein_coding Mus_musculus 2e-18 99
ENSMUST00000040628 Zfp182-002 protein_coding Mus_musculus 0.00000000000007 84
ENSMUST00000115334 Zfp182-003 protein_coding Mus_musculus 0.00000000000007 84
ENSMUST00000115333 Zfp182-001 protein_coding Mus_musculus 0.00000000000007 84
ENSMUST00000045228 Zkscan8-001 protein_coding Mus_musculus 0.000000007 68
ENSMUST00000183125 Zfp386-002 protein_coding Mus_musculus 0.0000003 62
ENSMUST00000073551 Zfp386-001 protein_coding Mus_musculus 0.0000003 62
ENSMUST00000106281 Zfp69-201 protein_coding Mus_musculus 0.000001 60
ENSMUST00000106280 Zfp69-001 protein_coding Mus_musculus 0.000001 60
ENSDART00000134050 si:ch211-255f4.1-001 protein_coding Danio_rerio 0.00001 57

Loading