C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger and SCAN domain containing 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000155128 Zscan2-003 ENSMUSG00000038797 10090 + 7:80862900-80875098 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; PlacentaTestisENSMUST00000155128
Transcript ID Placenta Testis
ENSMUST00000155128 0.979±0.00 49.678±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008FE CIL_0008FE_0002 VISTA 7:80488938-81090184
CIL_0001HN CIL_0001HN_0002 CGP 7:80860920-80901269

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0006355 IEA regulation of transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000327179 ZSCAN2-001 protein_coding Homo_sapiens 0 508
ENST00000334141 ZSCAN2-002 protein_coding Homo_sapiens 0 418
ENST00000379358 ZSCAN2-003 protein_coding Homo_sapiens 0 420
ENST00000448803 ZSCAN2-007 protein_coding Homo_sapiens 0 529
ENST00000485222 ZSCAN2-005 protein_coding Homo_sapiens 0 518
ENST00000538076 ZSCAN2-009 protein_coding Homo_sapiens 0 518
ENST00000540894 ZSCAN2-010 nonsense_mediated_decay Homo_sapiens 0 518
ENST00000540936 ZSCAN2-011 protein_coding Homo_sapiens 0 261
ENST00000541040 ZSCAN2-008 protein_coding Homo_sapiens 0 518
ENST00000546148 ZSCAN2-006 protein_coding Homo_sapiens 0 529
ENST00000546275 ZSCAN2-012 protein_coding Homo_sapiens 6e-37 158

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