C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000541653 AE000658.25-001 ENSG00000256081 9606 - 14:21585290-21586280 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; TestisENST00000541653
Transcript ID Testis
ENST00000541653 0.025±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008CX CIL_0008CX_0001 VISTA 14:21403052-22005074
CIL_00001T CIL_00001T_0001 CGP 14:21569803-21634940

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000027579 Actr3-201 protein_coding Mus_musculus 0 922
ENSMUST00000191578 Actr3-011 nonsense_mediated_decay Mus_musculus 0 922
ENSMUST00000178474 Actr3-001 protein_coding Mus_musculus 0 922
ENSMUST00000118948 Gm8822-001 processed_pseudogene Mus_musculus 0 885
ENSMUST00000188497 Actr3-002 protein_coding Mus_musculus 0 427
ENSMUST00000191544 Actr3-004 protein_coding Mus_musculus 0 388
ENSMUST00000191004 Actr3-008 protein_coding Mus_musculus 0 298
ENSMUST00000187460 Actr3-003 protein_coding Mus_musculus 0 279
ENSMUST00000185280 Actr3-007 protein_coding Mus_musculus 0 270
ENSMUST00000128586 Gm15899-001 processed_pseudogene Mus_musculus 0 191

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