C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ARP3 actin-related protein 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000178474 Actr3-001 ENSMUSG00000026341 10090 - 1:125392906-125435547 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000178474
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000178474 10.183±1.93 17.450±9.59 49.659±0.95 11.949±0.56 6.260±0.58 11.223±2.31 7.766±1.77 8.948±4.69 24.890±18.74 14.530±1.87 9.710±3.73 8.100±1.19 49.343±21.79

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000139 IEA Golgi membrane
GO:0002102 IEA podosome
GO:0003779 IEA actin binding
GO:0005200 IEA structural constituent of cytoskeleton
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005737 IEA cytoplasm
GO:0005884 IEA actin filament
GO:0005885 IEA Arp2/3 protein complex
GO:0005911 IDA cell-cell junction
GO:0005925 IEA focal adhesion
GO:0007163 IGI establishment or maintenance of cell polarity
GO:0008356 IGI asymmetric cell division
GO:0009743 IEA response to carbohydrate
GO:0010592 IEA positive regulation of lamellipodium assembly
GO:0016020 IEA membrane
GO:0016344 IGI meiotic chromosome movement towards spindle pole
GO:0030027 IDA lamellipodium
GO:0030056 IEA hemidesmosome
GO:0030838 IEA positive regulation of actin filament polymerization
GO:0031252 IEA cell leading edge
GO:0033206 IGI meiotic cytokinesis
GO:0034314 IEA Arp2/3 complex-mediated actin nucleation
GO:0043519 IEA regulation of myosin II filament organization
GO:0045666 IEA positive regulation of neuron differentiation
GO:0046677 IEA response to antibiotic
GO:0050775 IEA positive regulation of dendrite morphogenesis
GO:0051015 IEA actin filament binding
GO:0051321 IGI meiotic cell cycle
GO:0051491 IEA positive regulation of filopodium assembly
GO:0051653 IGI spindle localization
GO:0060076 IEA excitatory synapse
GO:0060271 ISS cilium morphogenesis
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000263238 ACTR3-001 protein_coding Homo_sapiens 0 2857
ENST00000415792 ACTR3-004 protein_coding Homo_sapiens 0 534
ENST00000439585 ACTR3P2-001 processed_pseudogene Homo_sapiens 0 1363
ENST00000443297 ACTR3-003 protein_coding Homo_sapiens 0 470
ENST00000446821 ACTR3-005 nonsense_mediated_decay Homo_sapiens 0 813
ENST00000478928 ACTR3-002 retained_intron Homo_sapiens 0 1249
ENST00000480448 ACTR3P3-001 processed_pseudogene Homo_sapiens 0 231
ENST00000484165 ACTR3-007 retained_intron Homo_sapiens 0 372
ENST00000489779 ACTR3-006 retained_intron Homo_sapiens 0 472
ENST00000535589 ACTR3-008 protein_coding Homo_sapiens 0 1881
ENST00000541653 AE000658.25-001 processed_pseudogene Homo_sapiens 0 922

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